Dealing with Missing Values: An In-Depth Look at Effective Techniques

Beltagy Mohamed
3 min readAug 28, 2024

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In the vast ocean of data, dealing with missing values and outliers can often feel like navigating through turbulent waters. However, with the right strategies, you can turn these challenges into opportunities for more robust data analysis. Let’s break down these issues and explore effective solutions.

1. Handling Missing Values

Method 1: Deletion

The simplest approach is to remove the rows or columns containing missing values. However, as the saying goes, “Not all that glitters is gold.” Deletion can be problematic, especially with small datasets where the removal of data might significantly impact model accuracy. A general rule of thumb is to avoid deletion unless missing values exceed 80% of the data. In such cases, it might be prudent to eliminate the column or row entirely.

Method 2: Row Deletion

For larger datasets, such as those with millions of rows, removing a few rows with missing values can be a viable option. However, this is not always the best solution and should be considered only when no other viable alternatives are available.

Method 3: Imputation

Imputation is a more sophisticated method for handling missing values. It involves filling in missing values based on other available data. Common techniques include using the mean, median, or mode of the data. For numerical data, these methods work exceptionally well. Imputation can also involve replacing missing values with constant values or frequently occurring values, but these should be considered as last resorts.

Categorical Data Imputation

When dealing with categorical data, such as a column with regional information, missing values can be filled with the most frequent category or labeled as “Other” to simplify the dataset.

2. Advanced Imputation Techniques

KNN Imputation

K-Nearest Neighbors (KNN) Imputation leverages the concept of proximity to fill in missing values. By evaluating the values of the nearest neighbors (i.e., similar data points), KNN imputes the missing value based on these neighboring data points. The choice of ‘K’, or the number of neighbors, significantly impacts the imputation results. A larger ‘K’ leads to values closer to the overall mean of the dataset, while a smaller ‘K’ focuses more on immediate neighbors. For datasets with millions of rows, KNN’s complexity can be a concern, and its effectiveness can be influenced by noise in the data.

SVD (Singular Value Decomposition)

Singular Value Decomposition (SVD) is another advanced technique for handling missing values. SVD decomposes the data matrix into principal components, capturing the underlying structure of the data and allowing for effective imputation. This method is particularly useful for complex and high-dimensional data, simplifying the data and improving imputation accuracy.

Comparing KNN and SVD

  • KNN: Relies on proximity, filling missing values based on nearby data points. It is effective for datasets with clear patterns and homogeneity among points.
  • SVD: Works on a deeper level, analyzing the data’s internal structure and imputing values based on principal components. It is suitable for complex datasets with many variables or intricate relationships.

When to Use Each Method

  • KNN: Ideal for datasets with a clear pattern or homogeneity among data points. It is effective for continuous data or data with a discernible structure.
  • SVD: Best suited for complex datasets with numerous variables or when dimensionality reduction is needed. It simplifies data analysis by focusing on the principal components.

In Summary

When addressing missing values in your next project, consider the nature of your data. If the data points are closely related, KNN may be the appropriate choice. For complex, high-dimensional data, SVD could offer better results. Selecting the right method depends on the dataset’s characteristics and the analytical goals you aim to achieve.

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Beltagy Mohamed
Beltagy Mohamed

Written by Beltagy Mohamed

I am a student at the Faculty of Artificial Intelligence and Computer Science. I write articles on topics in which I see gaps that need to be covered

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